Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015925587.1_cds_XP_016473824.1_65912
CDS Infomation

[gene=LOC107795664] [db_xref=GeneID:107795664] [protein=enhancer of mRNA-decapping protein 4-like] [protein_id=XP_016473824.1] [location=join(4010..4849,6906..6955,7029..7185,7304..7522,7898..8026,8284..9158,9449..10196,11190..11549,11623..11742,12061..12231,14595..14753,14928..15053,15374..15685)] [gbkey=CDS]
Sequence

ATGGCTTCCGCCGGAAATCCAAACCAGCCCGGCGGAGTACCGTTTGATATGCATAAATTC
TTCAATCCTTCAACTCCTCCACCAACAACTTCAACAAACCCTAATCCCCAAAATCCCATT
AACCCCACTTTGATTTCTTCCCCATTTCCACTTCCTTCAGCTTCTTATCCTCCGCCCACC
GCCGGCGGAGGCGGCGGTGGTAGCGGAGGACTGTATTATCCACCTCATACAACAACCCCT
TTTCACCATATCCCTCAATTCAATCCTCATATCCCTACACAATACGCACCTCAACAACAA
GATGGCCATTTGCATCCTCAAAGATCCATGTCTTTCCCTACTCCTCCACTTCAACCACCT
ACTCCTACTAGTCCTCACCAATTTTTGAACCCTAACCCTAACCCTAATCATGGGGCGAGA
CTTATGGCTTTGTTAAGTGCACCACCTTCTTCAACTCTAGAAGTTTCTTCTCAGCAACCC
ACCACTTTGCAAATTATTCCTCCTTTACAGCCTACAACTTCTGGGTCTGAGCTTTCTGAT
TTTTCTGCTTCACCAAATGTTGGGCCCGGTCCGGTCCGGATGCAGAGTACTAAGTTGCCT
AAAGGGAGGCATTTGAATGGGGAGAATGTTGTTTATGATATAGATGCTCGGTTGCCTGGT
GAAGTGCAGCCTCAGCTGGAGGTTACTCCAATTACTAAGTATGGCTCGGATCCGGGCCTT
GTTTTGGGCCGGCAAATTGCAGTTAACAAAAGCTATATATGTTATGGACTCAAATTGGGA
GCTATTCGAGTGCTTAATATTAACACTGCGTTGAGATCATTGCTTAAAGGTCTTGCACAG
AGGGTCACAGACATGGCTTTCTTTGCTGAAGATGTTCACCTTTTGGCTAGTGCAAGTGTT
GATGGGCGTGTTTACATATGGAAAATTACTGAAGGACCAGATGAGGAAGATAAGCCCCAA
ATTACAGGGAAGATTGTCATTGCTATTCAAATTGTTGGTGAAGGGGAATCTGTTCATCCT
CGAGTTTGTTGGCATTGTCACAAACAAGAAATTCTTGTGGTTGGAATCGGAAAACATGTT
CTAAAAATTGATACCACAAAATTTGGAAAAGCTGGAGTTTTTTCAGCGGATGAACCTCTC
AGGTGTCCTGTTGACAGGTTGGTTGATGGGGTACAACTTGTTGGTACTCATGATGGAGAA
GTAACTGATTTGTCAATGTGCCAGTGGATGACCACTCGATTGGTATCTGCTTCTGTGGAT
GGCACGGTTAAGATTTGGGAAGACCGGAAGCCACTACCAATTGCAGTTCTCAGGCCTCAT
GATGGTAATCCTGTTAATTCAGCTACCTTCCTGACTGCTCCACACCGCCCAGACCACATC
ATACTCATCACTGGGGGTCCACTTAATCGAGAAATGAAGATATGGGTATCAGCAAGTGAA
GAAGGCTGGTTGCTTCCTAGTGATGCTGATTCATGGCACTGTACACAAACGTTAGAGTTG
AAGAGTTCTGAAGCTCGTGCTGAAGAGGCATTTTTTAACCAAGTTGTAGCCTTGTCTCAA
GCAGGTCTGCTCTTACTAGCAAATGCAAAAAAGAATGCAATATATGCTGTTCATCTAGAG
TATGACCTGAACCCAATGGCAACCCATATGGATTACATAGCTGAATTTACAGTTACAATG
CCAATTTTGAGTTTCACTGGAACAAGTGATTTACTGCCTCATGGTGAACAGATTGTTCAA
GTGTATTGTGTGCAGACACAGGCTATTCAGCAGTATGCTTTGGACTTATGCCAATGCTTG
CCACCTCCCATGGAGAATGTGGTGGGCTTCGAAAGGACGGAATCTAGTGTTTCATGTGAC
GCTGCTCGTATTGAAGGATATGCTCCTGTTGATCCCCCTGGCAGTAAACAAATGGAGTTT
CCTTTAACTAGTTCTGCACCCAAATCTTCAGTGAATGAGAGTGTCACAGAGATTGTAGCT
ACAACTAGACCTCCTATGACTGAAGCGCGCACTGCCTTGACCACCTCTGTGGAATTTGCT
TCTTCCACCGTGCAATCTAAATCAGCTAGTTTGCCCAGTATAACTACCGATACTGATATT
GCCCCCTTTGCATCACCACCGCCTTTGAGTCCTGAGTTGGCTAGAAAATTTTCTGGTGTC
AGAAGCACATCAAACAGCTCTGAGCGTGGTCCCTCTATCAATGACCATGTTGGGGATCTT
AAAGTTGGTGAGTATTCAGTCGATAGGCAAATGGATGCCATTCATCCAAACTTGTCTGGT
CTTACTTCGTCGGACGGTGACCCAAGGAATAATGATGATGAAGTGTCACGTGATGATGGT
TCTTCAGGTGTTGGTAATCCAATCAAGTTTAAGCACCCGACTCATCTGGTGACTCCTTCA
GAGATATTGATGGCTAACTCATCCTCTGAGGTAAACCATGTTAATGAGCAGAAAAGTGAG
GGAGAATCGAGTATCCAGGATGTTGTAATCAACAAGGAAGTCCGCAATGTGGAGGTGGAG
GTTAAGGTTGGTGAAACAAGATTCAATCAAAAAACTGATATTGGCTCTCAAGAAGAACTT
CATACTTTTGTGTCGGAAAACAAAGAGAAAGCCTTTTGCTCTCAGGCATCTGATCTTGGA
ATAGAAATGGCTCGAGAATGTCATGCCTTATCGCCTGAAACTTATATTGTTGAGGAATCT
AGGCAGTTTGATGGGGCTTGTGGAACTGAGCGGCTGACCCAACCGTCAACTGCCCCAGAA
GAAGATCATGACTCGGCCAAGGAGATCTCTGGAAATGATTTAGACTCAAAGGTGCAAGTT
TCTGCGCATCAACTTTCAGCTCCTAGTGCCAAAGGAAAAAAGCAAAAGGCGAAGAACACT
CAAGGATTTAGACCATCTTCACCCTCGCCTAGTGCTTTCAACTCATCCGAATCCATCGAG
GGTGGTGTCAGCTCAAGTAACACCTCTATGGAAGCTGCATTCTCACAAATTTTGTCCATG
CATGAGATGCTAAATCAGCTTCTTAATATGCAAAAAGAAACACAAAAGCAGATGGGTATG
ATGGTCGCTGTTCCTGTTACCAAAGAAGGAAGAAGACTCGAGGCTGCCTTGGGACGGAGC
ATGGAGAAGGCTGTCAAGGCCAATTCCGATGTCTTATGGGCTCGTTTCCAAGAAGAGAGT
GCAAAACAAGAGAACTCACTTCGTGATCGTACTCAACAAATAACCAATATGATATCTAAC
TGCTTTAACAAGGACATGCCGGGGCTAATTGAGAAAATAATGAAGAAAGAACTGGCAGCT
GTTGGACAAGCCGTCACACGCAGTATTGCCCCTACAGTTGAGAAAGCTGTATCAACTGCT
ATTTCAGAAGCCTTCCAGAAAGGAGTTAGTGACAAGGCAGTGAACCAACTGGAGAGAACA
GTTAGCTCCAAACTCGAAGCTTCTGTTGCTAGGCAAATCCAAGCACAATTCCAAACCTCT
GGCAAGCAAGCTCTTCAGGAAACTTTGAAATCTACATTGGAAGCTTCGGTGATCCCTGCC
TTTGAGATATCATGCAAAGCAATGTTTGAGCAAGTAGATTTGACGTTTCAGAAAGGATTT
GCTGAACACACTGCTGCTGCTCTACTACAATTTGAGTCCATGCATTCACCATTAGCACTT
GCTTTAAGGGATGCCATTAATTCCGCATCATCAATGACTCAAACATTGAGTGGAGAGTTA
GCTGATGGTCAAAAGAAGTTGCTTACTCTTGCAGTTTCTGGAGCTAATTCCAATTCACCA
AATCCACTGATTAGCCACATGAGTAATGGACCATTACTGCATGAGAAGCTTGAGGCTCCT
GTTGATCCAACCAAAGAGCTATCTAGATTGTTAGCTGAACGCAAGTACGAGGAAGCATTC
ACTGCAGCGTTGCAAAGAAGTGATGTGTCTATTGTAGCATGGTTATGTTCTCAGGTTGAT
TTACCGGGTATTTTGTCGATGAATCCTCTCCCTTTGAGTCAAGGAGTACTTGTTTCGCTT
CTTCAGCAGTTGGCCTGTGATGTTAGCAAGGAAACAGCCCGAAAACTGTCCTGGATGAGG
GATGTGCTAACCGCCATAAATCCAACTGATCCAATGATTGCAGTGCACGTGCGGCCTATC
TTTGAGCAAGTATATCAGATACTAATCCATCATCGGAATCTTCCTACCACAACCCCTGCT
GAACTTTCAAGCATTCGGCTGATAATGCATGTCATCAACTCGATGCTGATGACCTGTAGT
AAATGA

Peptide Sequence

PEP ID

XP_016473824.1
PEP Infomation

PREDICTED: enhancer of mRNA-decapping protein 4-like [Nicotiana tabacum]
Sequence

MASAGNPNQPGGVPFDMHKFFNPSTPPPTTSTNPNPQNPINPTLISSPFPLPSASYPPPT
AGGGGGGSGGLYYPPHTTTPFHHIPQFNPHIPTQYAPQQQDGHLHPQRSMSFPTPPLQPP
TPTSPHQFLNPNPNPNHGARLMALLSAPPSSTLEVSSQQPTTLQIIPPLQPTTSGSELSD
FSASPNVGPGPVRMQSTKLPKGRHLNGENVVYDIDARLPGEVQPQLEVTPITKYGSDPGL
VLGRQIAVNKSYICYGLKLGAIRVLNINTALRSLLKGLAQRVTDMAFFAEDVHLLASASV
DGRVYIWKITEGPDEEDKPQITGKIVIAIQIVGEGESVHPRVCWHCHKQEILVVGIGKHV
LKIDTTKFGKAGVFSADEPLRCPVDRLVDGVQLVGTHDGEVTDLSMCQWMTTRLVSASVD
GTVKIWEDRKPLPIAVLRPHDGNPVNSATFLTAPHRPDHIILITGGPLNREMKIWVSASE
EGWLLPSDADSWHCTQTLELKSSEARAEEAFFNQVVALSQAGLLLLANAKKNAIYAVHLE
YDLNPMATHMDYIAEFTVTMPILSFTGTSDLLPHGEQIVQVYCVQTQAIQQYALDLCQCL
PPPMENVVGFERTESSVSCDAARIEGYAPVDPPGSKQMEFPLTSSAPKSSVNESVTEIVA
TTRPPMTEARTALTTSVEFASSTVQSKSASLPSITTDTDIAPFASPPPLSPELARKFSGV
RSTSNSSERGPSINDHVGDLKVGEYSVDRQMDAIHPNLSGLTSSDGDPRNNDDEVSRDDG
SSGVGNPIKFKHPTHLVTPSEILMANSSSEVNHVNEQKSEGESSIQDVVINKEVRNVEVE
VKVGETRFNQKTDIGSQEELHTFVSENKEKAFCSQASDLGIEMARECHALSPETYIVEES
RQFDGACGTERLTQPSTAPEEDHDSAKEISGNDLDSKVQVSAHQLSAPSAKGKKQKAKNT
QGFRPSSPSPSAFNSSESIEGGVSSSNTSMEAAFSQILSMHEMLNQLLNMQKETQKQMGM
MVAVPVTKEGRRLEAALGRSMEKAVKANSDVLWARFQEESAKQENSLRDRTQQITNMISN
CFNKDMPGLIEKIMKKELAAVGQAVTRSIAPTVEKAVSTAISEAFQKGVSDKAVNQLERT
VSSKLEASVARQIQAQFQTSGKQALQETLKSTLEASVIPAFEISCKAMFEQVDLTFQKGF
AEHTAAALLQFESMHSPLALALRDAINSASSMTQTLSGELADGQKKLLTLAVSGANSNSP
NPLISHMSNGPLLHEKLEAPVDPTKELSRLLAERKYEEAFTAALQRSDVSIVAWLCSQVD
LPGILSMNPLPLSQGVLVSLLQQLACDVSKETARKLSWMRDVLTAINPTDPMIAVHVRPI
FEQVYQILIHHRNLPTTTPAELSSIRLIMHVINSMLMTCSK

Transcript Sequence

Gene sequence data has not been registered.